Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKKMLFGSYDYHKISEDGKEKLSIKIDSGWVIGLSILGLIGWLVLK
1TBA Chain:A ((21-33))
---TGILFGNIDSEGRLLQDDDGEGRGGTGFDAELRENIGSLSKLGLD
General information:
TITO was launched using:
RESULT:
Template:
1TBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1437 for 44 contacts (32.7/contact) +
2D Compatibility (PS) -1279 + (NN) 868 + (LL) 332
1D Compatibility (HY) -800 + (ID) 200
Total energy: 358.0 ( 8.14 by residue)
QMean score : -0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1TBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TBA-query.scw
PDB file :
Tito_Scwrl_1TBA.pdb
: