Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEFKNIIVTGGAGFIGSNFVHYVYNNHPYVHVTVLDKLTYAGNRANIEAIL-GDRVELVVGDIADAELVDKL--AAKADAIVHYAAESHNDNSLEDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGNGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGADGEKNNKEV-------LELILEKMGQPKDAYDHVTDRAGHDLRYAIDSTKLREELGWEPQFTNFSEGLEETIKWYTENETWWKAEKDAVEAKYAKTQEVIK |
| 1KEU Chain:A ((3-340)) | ------ILITGGAGFIGSAVVRHIIKNTQDTVVNI-DKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLP--LFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKP-LETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81288 for 2658 contacts (-30.6/contact) +
2D Compatibility (PS) -34103 + (NN) -12473 + (LL) 708
1D Compatibility (HY) -25600 + (ID) 7450
Total energy: -160206.0 ( -60.27 by residue)
QMean score : 0.662
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