Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDYIDLALTYGGFTSLDKVYLEKKLDGLSKQQRLDFITPPPSVINAYFAEIYQKQGPEAATDYYFDLSKALGLFPKHLSFDEEKPFIRLNLSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFDETESQNITPETSLLGNVLQLKKDIIKITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN |
2LN3 Chain:A ((7-25)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSQNKEELLEIALKFISQGLDLEVEFDSTDDKEIEEFE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2502 for 75 contacts (33.4/contact) +
2D Compatibility (PS) -2222 + (NN) -3018 + (LL) 12216
1D Compatibility (HY) -800 + (ID) 450
Total energy: 8228.0 ( 109.71 by residue)
QMean score : 0.659
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