Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MKRSFF-------QKTFNLNLNLLFFGFIAFLISYGFHVLGNQIKTSSFLSSQSVFADIQTKLQVVDQYTQSIAYLFILIAIILTLTELCQRIMKDSIWNYFKSVYQTL--
2LZ0 Chain:A ((1-100))
GSHEGEPVVGMDKSLFAGNTVIREITVQPNIGLLYDGMFS-----GCTALEKLILTGEDPSAYSAGDGLRDGADF----------------LICVPEEALDRYRRDYFWQTYAAWIQPMEQ
General information:
TITO was launched using:
RESULT:
Template:
2LZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45014 for 523 contacts (-86.1/contact) +
2D Compatibility (PS) -8255 + (NN) 2940 + (LL) 2524
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -54405.0 ( -104.02 by residue)
QMean score : 0.150
(partial model without unconserved sides chains):
PDB file :
Tito_2LZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LZ0-query.scw
PDB file :
Tito_Scwrl_2LZ0.pdb
: