Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNREEVQLLGFEIVAYAGDARSKLLEALRAAEAGDFSKADALVEEASGCIAEAHKSQTTMLAKEAAGEEIPYSVTMMHGQDHLMTTILLKDVMHHLIELYKRGIK
4XGC Chain:A ((236-267))
---EAVQLVARKVAAVSGDARRALDICRRATEIAD----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4XGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1536 for 144 contacts (10.7/contact) +
2D Compatibility (PS) -3871 + (NN) -4894 + (LL) 6384
1D Compatibility (HY) -800 + (ID) 700
Total energy: -2345.0 ( -16.28 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_4XGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGC-query.scw
PDB file :
Tito_Scwrl_4XGC.pdb
: