Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGDNIKSLRRTHDLTQPEFAKIIGISRNSLSRYENGTSSVSTELIDRICQKFNVSYVDIVGEDKMMTPVEDYQLTIKIEVLKERGSAILSRLYRHQDEQGIAFDDESNPWILISDDVADLVNTKIYLVDTFEELERYNGYLDGIERMLNLANHQVVA
4YG1 Chain:A ((13-67))
-LANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCD-------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4YG1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27566 for 357 contacts (-77.2/contact) +
2D Compatibility (PS) -5804 + (NN) 332 + (LL) 7416
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -30822.0 ( -86.34 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_4YG1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YG1-query.scw
PDB file :
Tito_Scwrl_4YG1.pdb
: