Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGKSISVKSYANIAIIKYWGKADAEKMIPATSSISLTLENMYTETRLTTLGKDAKKDEFYISGVLQNDHEHDKMSAILDRFRQ--NKSGFVKIETTNNMPTAAGLSSSSSGLSALVKACNDFFGTNLSQSQLAQEAKFASGSSSRSFFGPVAAWDKDSGDI----YKVHT---DLDLAMIMLVLNDKRKPISSREGMKICTETSTTFNEWVRQSEQDYQDMLVYLKNNDFQKVGQLTERNALAMHSTTKTATPAFSYLTEETYKAMDVVKKLREKGHECYYTMDAGPNVKVLCLRQDLEALAAILEKDYRIIVSTTKELADG |
| 4DPX Chain:A ((8-305)) | ---KSGKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVT-FDPDFTEDCLILNGNEVNAKEKEKIQNYMNIVRDLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEKGHDDLTSYAHGINSNGWEKDLSMIFVVINNQSKKVSARSGMSLTRDTSRFYQYWLDHVDEDLNEAKEAVKNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDAGPNVKVLVEKKNKQAVMEQFLKVFDESKIIASDIISS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72568 for 2402 contacts (-30.2/contact) +
2D Compatibility (PS) -31171 + (NN) -9094 + (LL) 12
1D Compatibility (HY) -21600 + (ID) 5850
Total energy: -140271.0 ( -58.40 by residue)
QMean score : 0.445
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