Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLALITDTSAYLPEAIENHEDVYVLDIPIIIDGKTYIEGQNLTLDQYYDKLAASKELPKTSQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQ----FLIEEHPNLTIAFPDTKITSAPQGNLVRNALMCS-REGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIVVYEKVRTEKKALKRLAEIVKEMTADGEYDIAIIHSRAQDKAEQLYNLLAKAGLKDDLEIVSFGGVIATHLGEGAVAFGITPKN
3FDJ Chain:A ((83-278))----------------------------------------------------------------------------------------ITAGMSGTYNSAMAARAVYLEEHPQAKVRVIDSK-STGPQMRIILEQLQQMIEEGKKFEEIDGAIDAYMQKTRLFCSLKSLHNLAQNGRVSKVVASAAEVLGISVIGTASSHGTLEAIGKCRGDKKLLVKLQALLDDAGYEGG-KLRICHVENEALADKIADMIKQAYGTTDVCVYKAGGLCSYYAERGGIILSCETK-


General information:
TITO was launched using:
RESULT:

Template: 3FDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99351 for 1477 contacts (-67.3/contact) +
2D Compatibility (PS) -21080 + (NN) -10171 + (LL) 6640
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -135862.0 ( -91.99 by residue)
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_3FDJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FDJ-query.scw
PDB file : Tito_Scwrl_3FDJ.pdb: