Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKTIYDITIVGGGPVGLFAAFYAGLRGVSVKIIESLSELGGQPAILYPEKKIYDIPGYPVITGRELI---DKHIEQLERFKDSIEICLKEEVLSFEKVDDVFTIQTD-KDQHLSRAIVFACGNGAFAPRLLGLENEENYADNNLFY-NVTKLEQFAGKHVVICGGGDSAVDWANELDKIAASVAIVHRRDAFRAHEHSVDILKAS-GVRILTPYVPIGLNGDSQRVSSLVVQKVKGDEVIELPLDNLIVSFGFSTSNKNLRYWNLDYKRSS-INVSSLFETTQEGVYAIGDAANYPGKVELIATGYGEAPVAINQAINYIYPDRDNRVVHSTSLIK |
| 3F8D Chain:A ((16-319)) | -----FDVIIVGLGPAAYGAALYSARYMLKTLVIGETP--GGQ---LTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYE-----VPVLL-DIVEKIENR--EFVVKTKRKGEFKADSVILGIG---VKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240755 for 2581 contacts (-93.3/contact) +
2D Compatibility (PS) -31310 + (NN) -5002 + (LL) 1816
1D Compatibility (HY) -21200 + (ID) 4100
Total energy: -300551.0 ( -116.45 by residue)
QMean score : 0.389
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