Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKE-IGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 4OB9 Chain:A ((10-345)) | FRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQ-K------------------------------------------GG-GRSSARETAMRVAAGAIAKKYLAEKFGVLIRGHVTQIGNE---VAEKLDWNEVPNNPFFCGDVDAVPRFEA----LVTSLREQGTSCGAKLEILAEKVPVGWGEPV-FDR-LDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELT---SHGFL--ANHAGGILGGISSGQTIRVAIALKPTA--------------------KGRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQNADVVPPFAPIEP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134964 for 2263 contacts (-59.6/contact) +
2D Compatibility (PS) -30462 + (NN) -11496 + (LL) 5592
1D Compatibility (HY) -14800 + (ID) 5950
Total energy: -192080.0 ( -84.88 by residue)
QMean score : 0.436
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