Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVEVDLPNHSYHIKIEEGCFSEAGDWVSHLWQKQMITIITDSNVEILYGESLVNQLKKQGFTVH------VFSFAAGEASKTLEVANRIYGFLAKHHMT--RSDGIIALGGGVVGDLAAFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTSFAKNMVGTFAQPDGVLIDPVTLKTLGNRELVEGMGEVIKYGLIDDIKLWHILEEMDGTIDSILDSAL---------------AIIYHSCQVKRKHVLADQYDKGLRMHLNFGHTIGHAIEVHAGYGEIMHGEAVAIGMIQLSRVAERKNLMPRGISQDIYNMCL-KFGLPVHYAE-----------WDKDVLFDILSHDKKASGQFIKIVILPQLGSATVHQIPLEEMRDYLEK |
| 1NVA Chain:A ((41-373)) | --------------------------------------LVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSA----GGLRNLLNWGHSIGHAIEAIL-TPQILHGECVAIGMVKEAELARHLGIL-KGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALD-----PKKKIVLLSAIGTPYETRASVVANEDIRVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190243 for 2333 contacts (-81.5/contact) +
2D Compatibility (PS) -30316 + (NN) -6778 + (LL) 2800
1D Compatibility (HY) -21200 + (ID) 5650
Total energy: -251387.0 ( -107.75 by residue)
QMean score : 0.399
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