Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGKFQKNLKKSVVLNRWMNVGLILLFLVGLLITSYPFISNWYYNIKANNQVTNFDNQTQKLNAKEINRRFELAKAYNRTLDPSR--LSDPYTEKEKKGIAEYAHMLEITEMIGYIDIPSIKQKLPIYAGTTSSVLEKGAGHLEGTSLPIGGKSSHTVITAHRGLPKAKLFTDLDKLKKGKIFYIHNIKEVLAYKVDQISVVKPDNFSKLLVVKGKDYATLLTCTPYSINSHRLLVRGHRIKYVPPVKEKNYLMKELQTHYKLYFLLSILVILILVALLLYLKRKFKERKRKGNQK |
| 4G1J Chain:A ((47-252)) | ---------------------------------------------------INAFKEAVTKIDRVEINRRLELAYAYNASIAGA-PALKDPYS-------VEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKTVQKDSKTFRQ--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99613 for 1494 contacts (-66.7/contact) +
2D Compatibility (PS) -20441 + (NN) -6310 + (LL) 9380
1D Compatibility (HY) -20400 + (ID) 5350
Total energy: -142734.0 ( -95.54 by residue)
QMean score : 0.454
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