Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
1MDY Chain:A ((49-64))---------------------------------------------------------------------------------------------------VEILRNAIRYIEGLQAL


General information:
TITO was launched using:
RESULT:

Template: 1MDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2034 for 55 contacts (37.0/contact) +
2D Compatibility (PS) -1742 + (NN) -1470 + (LL) 10608
1D Compatibility (HY) -2400 + (ID) 300
Total energy: 6730.0 ( 122.36 by residue)
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_1MDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MDY-query.scw
PDB file : Tito_Scwrl_1MDY.pdb: