Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METYTLSNTLNIPKIGFGTWQLTEGEEAYKAVTHALKVGYTHIDTAQIYGNEHSVGRAIRDSGLARESIFLTTKIWNDKHDYHLAKASIDESLQKLGVDYIDLLLIHWPNPKALRENDAWKAGNAGTWKAMEEAYKEGKVKAIGVSNFMKHHLEALFETAEIKPMVNQIILAPGCAQEDLVRFCKGNDILLEAYSPFGTGA--IFENESIKAIAEKYGKSVAQVALRWSLDNGFLPLPKSATPKNIEANLDIFDFQLNEDDITTLIQLDSGIK-PKDPDNVSF |
1MZR Chain:A ((36-293)) | -----------MPQLGLGVWQAS-NEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNASVNREELFITTKLWND--DHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKG--------MIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116310 for 2183 contacts (-53.3/contact) +
2D Compatibility (PS) -27903 + (NN) -14724 + (LL) 1072
1D Compatibility (HY) -22400 + (ID) 5500
Total energy: -185765.0 ( -85.10 by residue)
QMean score : 0.577
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