Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVG-KLDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQ-EINVERIVL
3IST Chain:A ((6-267))
---QAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNL-LDATDEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKL
General information:
TITO was launched using:
RESULT:
Template:
3IST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -250281 for 2386 contacts (-104.9/contact) +
2D Compatibility (PS) -27584 + (NN) -5147 + (LL) 24
1D Compatibility (HY) -30000 + (ID) 7000
Total energy: -319988.0 ( -134.11 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3IST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IST-query.scw
PDB file :
Tito_Scwrl_3IST.pdb
: