Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCPKCGYNKSSVVDSRQAEEGTTIRRRRECEKCGNRFTTFERLEELPLLVIKKDGTREQFSRDKILNGIIQSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVRFASVYKSFKDVDEIEELLQQITKRVRSKKSGSV
3HNC Chain:A ((14-66))
-------------------------------------------------------------MFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYS----GVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINP
General information:
TITO was launched using:
RESULT:
Template:
3HNC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28879 for 311 contacts (-92.9/contact) +
2D Compatibility (PS) -5419 + (NN) -581 + (LL) 4164
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -32765.0 ( -105.35 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_3HNC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HNC-query.scw
PDB file :
Tito_Scwrl_3HNC.pdb
: