Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSKNPDNYMFLMHKISLTTNSGSLTLSGTNGPIIWEPCLDKPTDENNRFNLEKNEFSELKIFEITEEVEETYNDMMKLSWVEAISKSVIDFTNNIEAEKVDL--REQQYLISAIEAWRALSRELGQSNTIQPYKKTAIKMEDLI |
4GZD Chain:A ((72-145)) | --------------------------------------------------DLAQRSYDSVDFFEIMDMLDKRLNDKGKYWRHVAKSLTVLDYLVRFGSENCVLWCRENFYVIKTLREFRHEDEEGFDQGQIIRVKAKELVSLLND |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4371 for 417 contacts (10.5/contact) +
2D Compatibility (PS) -7519 + (NN) -1431 + (LL) 1616
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -9513.0 ( -22.81 by residue)
QMean score : 0.228
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