Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNRYKFVFGDKPLTLTTDKDNLFMEEIERVATEKY-EAIKEKLPNADNETIAILMAINALSVQLSREI---DIEKMEDELNKLRSKTISDIKEKVSED
1QF6 Chain:A ((39-140))
---RVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWH
General information:
TITO was launched using:
RESULT:
Template:
1QF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18653 for 515 contacts (36.2/contact) +
2D Compatibility (PS) -10466 + (NN) -2422 + (LL) 364
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -1921.0 ( -3.73 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_1QF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QF6-query.scw
PDB file :
Tito_Scwrl_1QF6.pdb
: