Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKVLT--ACGNGMGSSMVIKMKVENALRQLGVSNFESASCSVGEAKG-----LAANYDIVVASNHLIH-ELDGRTKGHLVGLDNLMDDNEIKTKLQEIL
2M1Z Chain:A ((2-86))
KRKIIAVTACATGVAHTYMAAQALKKGAKKMGNL-IKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAAL
General information:
TITO was launched using:
RESULT:
Template:
2M1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41478 for 518 contacts (-80.1/contact) +
2D Compatibility (PS) -8597 + (NN) -3748 + (LL) -80
1D Compatibility (HY) -400 + (ID) 300
Total energy: -54603.0 ( -105.41 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_2M1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M1Z-query.scw
PDB file :
Tito_Scwrl_2M1Z.pdb
: