Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRIRKSLIFVLGVVTLICLCACTKQSQQKNGLSVVTSFYPVYSITKAVSGDLNDI-KMIRSQSGIHGFEPSSSDVAAIYDADLFLYHSHTLE----AWARRL-EPSLHHSKVSVIEASKGMTLDKVHGLEDVEAEKGVDESTLYDPHTWNDPVKVSEEAQLIATQLAKKDPKNAKVYQKNADQFSDKAMAIAEKYKPKFK--AAKSKYFVTSHTAFSYLAKRYGLTQLGIAGVSTEQEPSAKKLAEIQEFVKTYKVKTIFVEEGVSPKLAQAVASATRVKIASLSPLEAVPKNNKD---YLENLETNLKVLVKSLNQ |
3ZTT Chain:A ((26-301)) | -----------------------------K--LKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIFYNGINLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEG----QNEKGKE-----DPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -69085 for 2273 contacts (-30.4/contact) +
2D Compatibility (PS) -28741 + (NN) -14147 + (LL) 3712
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -126761.0 ( -55.77 by residue)
QMean score : 0.467
|
|
|