Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRIWYLIIIITVILGGLVMKNLFATTGESSKKQEQDRVVKYIKQHVELTNGE-PVNQIEFVEFEKNQMTGSWLLTSKINNKFFISFKIDEFGGEIRTSNYKANEFNVNSEKQNIKSNNKLEVSYVEDN
4ZN4 Chain:B ((413-447))
-------------------------------------------LRRHLRGAHAEDPVVKVEFVKSPPNAAMAGWLLTS----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4ZN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2581 for 131 contacts (-19.7/contact) +
2D Compatibility (PS) -3503 + (NN) 572 + (LL) 6856
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -1706.0 ( -13.02 by residue)
QMean score : -0.035
(partial model without unconserved sides chains):
PDB file :
Tito_4ZN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZN4-query.scw
PDB file :
Tito_Scwrl_4ZN4.pdb
: