Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVNITLEHKESGERLYLTSKNKRNTPDRLQLKKYSPKLRKHVVFTEVK
2APO Chain:B ((17-29))
-------------------------------LKEICPKCGEKTVIPKPP
General information:
TITO was launched using:
RESULT:
Template:
2APO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1647 for 41 contacts (40.2/contact) +
2D Compatibility (PS) -1230 + (NN) 191 + (LL) 1940
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 1098.0 ( 26.78 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_2APO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APO-query.scw
PDB file :
Tito_Scwrl_2APO.pdb
: