Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEGKPTGEIVAYKAWFVQE---GQDPFQVKFEETIELPAFQSMIQFDTLQACEVKYNIYFKANGIKEVR
3FT1 Chain:A ((13-71))
---------DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-----GNVWEVKSSKPLVGPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKPEEQEF-------
General information:
TITO was launched using:
RESULT:
Template:
3FT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9839 for 298 contacts (33.0/contact) +
2D Compatibility (PS) -6011 + (NN) -2192 + (LL) 2132
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 1768.0 ( 5.93 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_3FT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FT1-query.scw
PDB file :
Tito_Scwrl_3FT1.pdb
: