Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAEVLYELKVAEAKYFFYLREAKQRNLKISRWK
3NRX Chain:A ((12-45))
-------------HKELFEGVQKWEETWRLFLEFERKASDPN--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NRX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5957 for 103 contacts (57.8/contact) +
2D Compatibility (PS) -3387 + (NN) -4423 + (LL) 4848
1D Compatibility (HY) -400 + (ID) 350
Total energy: 2245.0 ( 21.80 by residue)
QMean score : 0.766
(partial model without unconserved sides chains):
PDB file :
Tito_3NRX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NRX-query.scw
PDB file :
Tito_Scwrl_3NRX.pdb
: