Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNNHFFYVVKCK-DNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIFAESFSTKREAMQAEYYFKKLTRKKKELYIEEKRNSKEAVYVKAPNEL
2LWF Chain:A ((86-118))
----ASGVYAVYDKSDELQFVGISRNIAASVSAHLKS---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3719 for 149 contacts (-25.0/contact) +
2D Compatibility (PS) -3878 + (NN) -3662 + (LL) 5876
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -6933.0 ( -46.53 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2LWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LWF-query.scw
PDB file :
Tito_Scwrl_2LWF.pdb
: