Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRRRGVMSDEFKYELAKDLGFYDTVKNGGWGEIRARDAGNMVKRAIEIAEQQMAQNQNNR
3RHR Chain:A ((85-117))
-----------------------EAFENGLWGKINARDRGRLLYRLADVMEQHQEE-----
General information:
TITO was launched using:
RESULT:
Template:
3RHR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 69 for 127 contacts (0.5/contact) +
2D Compatibility (PS) -3658 + (NN) -1657 + (LL) 1472
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -5974.0 ( -47.04 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_3RHR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RHR-query.scw
PDB file :
Tito_Scwrl_3RHR.pdb
: