Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSYYDQKGSSSVPEQHDVTMKGRKHLDISGVKHVESFDNEEFLLETVMGMLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQQGDKAKGFFSKLFK
3D29 Chain:G ((154-227))
---YVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVG---VATKDKFFTL--------------------
General information:
TITO was launched using:
RESULT:
Template:
3D29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 635 for 389 contacts (1.6/contact) +
2D Compatibility (PS) -7808 + (NN) -2058 + (LL) 1448
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -12233.0 ( -31.45 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_3D29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D29-query.scw
PDB file :
Tito_Scwrl_3D29.pdb
: