Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKVYVEGMEFYGYHGVFTEENKLGQRFKVDLTAELDLSKAGQTDDLEQTINYAELYHVCKDIVEGEPVKLVETLAERIAGTVLGKFQPVQQCTVKVIKPDPPIPGHYKSVAIEITRKKS
1DHN Chain:A ((3-120))
-DTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLSEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVREN-
General information:
TITO was launched using:
RESULT:
Template:
1DHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62930 for 836 contacts (-75.3/contact) +
2D Compatibility (PS) -12805 + (NN) -8097 + (LL) 180
1D Compatibility (HY) -12800 + (ID) 2800
Total energy: -99252.0 ( -118.72 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1DHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DHN-query.scw
PDB file :
Tito_Scwrl_1DHN.pdb
: