Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCSTCNSHTAHLETK
2APO Chain:B ((17-29))
-------------------------------LKEICPKCGEKTV-----
General information:
TITO was launched using:
RESULT:
Template:
2APO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 356 for 41 contacts (8.7/contact) +
2D Compatibility (PS) -1325 + (NN) 139 + (LL) 2748
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 118.0 ( 2.88 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_2APO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APO-query.scw
PDB file :
Tito_Scwrl_2APO.pdb
: