Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITNRQIEAARIAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKVLFEISGVSEEVAREALRLASHKLPIKTKFVKREEIGGESNES
1Y69 Chain:K ((6-136))
----KRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTKMVKRE---------
General information:
TITO was launched using:
RESULT:
Template:
1Y69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26362 for 827 contacts (-31.9/contact) +
2D Compatibility (PS) -13875 + (NN) -2141 + (LL) 456
1D Compatibility (HY) -12000 + (ID) 4050
Total energy: -57972.0 ( -70.10 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_1Y69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y69-query.scw
PDB file :
Tito_Scwrl_1Y69.pdb
: