Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------------MGVKKEKGR-KRFRKRKTFGNQILPLELLIEKNKREIINSAELMEEIYMKIDEKHTQCVTK-----------------------------------------------------------------------------------------------
4D5B Chain:A ((28-339))AFDESFFSFGGHVGTSVEYEDKVTRGFNNTDKKEKTITNEVFNFFYNNPQWNFMGFYSFKIENREQKEPGYYENEDGIKQLFSLNKGHDLGNGWATGLIYELEYTRSKVYSPDVSGLRKNLAEHSIRPYLTYWNNDYNMGFYSNLEYLLSKEDRNAWGKRQEQGYSALFKPYKRFGNWEVGVEFYYQIKTNDEKQPDGTINEKSDFNERYIEPIVQYSFDDAGTLYTRVRVGKNETKNTDRSGGGNAGINYFKDIRKATVGYEQSIGESWVAKAEYEYANEVEKKSRLSGWEARNKSELTQHTFYAQALYRF


General information:
TITO was launched using:
RESULT:

Template: 4D5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15658 for 304 contacts (51.5/contact) +
2D Compatibility (PS) -6067 + (NN) 6592 + (LL) 0
1D Compatibility (HY) -800 + (ID) 550
Total energy: 14833.0 ( 48.79 by residue)
QMean score : 0.028

(partial model without unconserved sides chains):
PDB file : Tito_4D5B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D5B-query.scw
PDB file : Tito_Scwrl_4D5B.pdb: