Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFI-KKQGAIPSFKGYNGFRGSICVSVNEELVHGIPG-SRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
1C21 Chain:A ((5-248))
----KTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGQGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILT--
General information:
TITO was launched using:
RESULT:
Template:
1C21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83890 for 2094 contacts (-40.1/contact) +
2D Compatibility (PS) -26608 + (NN) -11278 + (LL) 964
1D Compatibility (HY) -22000 + (ID) 5700
Total energy: -148512.0 ( -70.92 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1C21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C21-query.scw
PDB file :
Tito_Scwrl_1C21.pdb
: