Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNIGKTEFILLLVVGILTIINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
2DO3 Chain:A ((473-511))
KMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHEL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DO3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22109 for 204 contacts (-108.4/contact) +
2D Compatibility (PS) -4219 + (NN) -342 + (LL) 1600
1D Compatibility (HY) -400 + (ID) 400
Total energy: -25870.0 ( -126.81 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2DO3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DO3-query.scw
PDB file :
Tito_Scwrl_2DO3.pdb
: