Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKG---TIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKY-------SQLAKSQEFRSYLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE |
3RPX Chain:A ((70-180)) | ---------------------------------TPNFVVEVIKNDDGKKA---LVLDCHYPE----------SDIFSIREVSFQST-----K----DTNY------TLNTDS--------LDWALYDHLMDFLADRGVDNTFADELVELSTALEHQEYITFLEDL------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17691 for 444 contacts (39.8/contact) +
2D Compatibility (PS) -9108 + (NN) -1479 + (LL) 8464
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: 6418.0 ( 14.45 by residue)
QMean score : 0.288
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