Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLLTPTSVVLGVLLSQF---LNGYEWAVPWIFAFITFAGSLSANFQSLRHALSHPLPMILALFVLHIFMPLFAWGSGHLIFKGDP--LTITGLTLAVVIPTGITSLIWAAMYKGNV---GLTLSIILVDTVLSPLIVPLSLSLLAGAQVHMDVWGMMKGLIVMVVIPSFLGMLFNQMSSPERTAFVSSALSPFSKLCLMAVIAINSSAIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQILAALFGYMLNRFELKPMLQKA |
| 5BZ3 Chain:A ((34-171)) | ---EVLAGVLVGPALLGLVHEGEILEFLAELGAVFLLFMVGLETRLKDILAVGKEA--FLVAV-LGVALPFLGGYLYGLE-IGFETLPALFLGTALVATSVGITA-RVLQELGVLSRPYSRIILGAAVIDDVLGLIVLACVNGVAE------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5BZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77122 for 767 contacts (-100.6/contact) +
2D Compatibility (PS) -12571 + (NN) 2307 + (LL) 16312
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -77074.0 ( -100.49 by residue)
QMean score : -0.021
|
|
|