Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQNQ--IELLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSDITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGSISGSYWYENAA---ETIHISSLKPGTARV-FMSIGSEEGREKQSIQRHMLKKTKQVHQSLKEKGFTE------DQLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL |
3C8D Chain:A ((175-382)) | -----SERLKNSRRVWIFTT-----EER--PLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLID------------AIDTTHRAHELPCNADFWLA-VQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMIMRANQALYAQLH-PIKESIFWRQVDGGHDALC--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73396 for 1503 contacts (-48.8/contact) +
2D Compatibility (PS) -20294 + (NN) -7236 + (LL) 2968
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -111408.0 ( -74.12 by residue)
QMean score : 0.459
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