Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDA-KLLDVHPQGAISFSGKFPDMFKDITDKA---EPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENM---MLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAP--NEVKAAKAQELSS------LEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPLAQGGTAWSKVRFLKAAAEKLTQN |
| 3LHS Chain:A ((12-282)) | --------------------------------------------DENGTVKVPKDAKRIVVLEYSFADALAALDVKPVG-IADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFD-RNQKVLPAVVAKAGLLAHPNYSYVGQFL-NELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMII-MTDHAKKDSAE-FKKLQEDATWKKLNAVKNNRVDIVDRD-------VWARSRGLISSEE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21254 for 2055 contacts (-10.3/contact) +
2D Compatibility (PS) -28108 + (NN) -21581 + (LL) 4744
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -80499.0 ( -39.17 by residue)
QMean score : 0.500
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