Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSI----DADLTVVKMKHWKRKMDFDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFEAVKTGLS---VIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSKTRKKYLIY |
4JJA Chain:A ((4-368)) | ----------------------------------SDVIIGAEQTK-AYFPILKNKRIAIFSNHTGMVG-NKHLLDILLE-NNFNVVAIFSPEHGFRGN---------TIDSKTGVPILSL-----KPSEASMKKFDILIVDIQDVGLRFYTYYISMVRLMDACAEYDRKILILDRPNPNGH-YVDGPILDMKYKSGVGGLPIPIVHGMTLGELALMVNGERWLPSSRICDVTVIPCKNYTHQTMYR----LPIPPSPNLPNMKAIYLYPSICLFEGTPVSLGRGTTLPFQVYGHPNMTGYNYN--FTPRSIPGAKN---------PPQLNKLCHGVNLSNLSDEEI--WKKGINLDYLIDAYHNLNMGDRFFR--PFFELLVGTDYVRKMIEGGKSADEIKARWKRDVERFKIQRKPYLLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134633 for 2965 contacts (-45.4/contact) +
2D Compatibility (PS) -36264 + (NN) -15355 + (LL) 3808
1D Compatibility (HY) -30400 + (ID) 6800
Total energy: -219644.0 ( -74.08 by residue)
QMean score : 0.523
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