Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANSELTPELAFKVGR-FGGYVLTKDKQRPKVLIGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVSYLTKAMDAEAGVMISASHNPVQDNGIKFFGGDGFKLSDEQ-EAEIERLMDEPEDKLPRPVGA--DLGLVNDYFEGGQKYLQFLKQTADEDFTGIHVALDCANGATSSLATHLFADLDADVSTMGTSPNGLNINDGVGSTHPEALS---AFVKEKNADLGLAFDGDGDRLIAVDEKGNIVDGDQIMYICSKHLKSEGRLKDDTVVSTVMSNLGFYKALEKEGIKSVQTAVGDRYVVEAMKKDGYNVGGEQSGHLIFLD-YNTTGDGLLSAIMLMNTLKATGKPLSELAAEMQKFPQLL----VNVRVTDKYKVEENEKVKAVISEVEKEMN-GDGRI---------------LVRPSGTEPLVRVMAEAKTKELCDEYVNRIVEVVRSEMGLE |
| 1PCJ Chain:X ((19-452)) | ---------IRGVVGDTLTAETAYWIGRAIGSESLARGE--PCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQIQALRERIE---KNDLASGVGSVEQVDILPRYFKQIRDDIAMAKP--------MKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGAD--IIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHV---FSAFPSDISTPEINITVTEDSKF-------AIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADT----EEELERIKTVFRNQL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156251 for 3590 contacts (-43.5/contact) +
2D Compatibility (PS) -43175 + (NN) -17425 + (LL) 1576
1D Compatibility (HY) -28800 + (ID) 6700
Total energy: -250775.0 ( -69.85 by residue)
QMean score : 0.518
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