Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSANLTDFVTKTIEEMNSFDRENMECIKKLIRKAIDFYHLKSYEEVEETHSG-NVRFLHVHSM--MEENMLSKMIVVTRNGKTDLDIEGVYEGYVVREY
2P84 Chain:A ((4-79))
------------IPKFREFDRE---------RHRTDYQKGMSYAEQQDFDMGFTIWFDHIEDLDLIEKDGTINRIVMMSTGLKDKNVKEIYESDIVR--
General information:
TITO was launched using:
RESULT:
Template:
2P84.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11282 for 401 contacts (28.1/contact) +
2D Compatibility (PS) -6875 + (NN) 6980 + (LL) 2084
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: 9171.0 ( 22.87 by residue)
QMean score : 0.103
(partial model without unconserved sides chains):
PDB file :
Tito_2P84.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P84-query.scw
PDB file :
Tito_Scwrl_2P84.pdb
: