Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKRMIVRMTLPLLIVCLAFSSFSASARAA-------SEEKYWDHWIERHAQPLDASNASNKDLRFLK--KVLKGKRIVQLGETTHGAGEINATKVRMIKYLHEELGYDVLAFESGFPDTNASYLNMDQLTPKSTMKNSIYAVWHTEDVVELFDYMKEQKEKGDPLILTGFDIQSMKNSFNVAATQWVKAVDPEKAELLSQSENDFSTLVTDSNTFDEFSQKKEKLVKNYQKLIKFTKTHASELKENLPKEPKAYEMFMHSLQLRIDVMETYMLEEMKEKLEEYPENIEDFSFFMRDRMMAEQFQWVADTLYPKKKIIVWGHNYHLRKQNTKMIKDWVQLNGPNMGDYLPERLKKQTYTIGIYAYSGASLDSSDNKTVKPVTSPPPSGSLEALLKAADRPAVFVDFLHTKNKKGTSWMYTPRTALYWGYMEEQMILKEQYDGVIWLEHITPSVIIK
4C5W Chain:A ((95-279))--------------------CFSKQARAKLQRELFFPECQYWGS--ELQLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRM-GFLYLTFYGHTWQVQDKIDANNVAY------TTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNV-----------CQKLKKNNPQAFQILSSTFVDFTDIGVDYCDFS--VQSKHKIIE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4C5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 540 -15960 -29.55 -90.68
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -29.55
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.125

(partial model without unconserved sides chains):
PDB file : Tito_4C5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C5W-query.scw
PDB file : Tito_Scwrl_4C5W.pdb: