Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKVGLVDDYRVDLEKLEAIVSRMQDVEIVFSTDSAKEAYRRV-KNGDIDLLLADIEMPHMSGYELADLIKSHSL--DVDVIFVTGHGGYA--VHAFDLNVHDYIMKPYYADRLAASFDRYLKKKTETSLNGRILIKQKSEMHVLQKKDIIFAERTGRSTTIVTTAEEVQTYQTLNDIKGDLPEKDFLRSHRSFIINIHYIKHFSAYTKHSFTVSFEGTSKKAMITKQQLDYFQNYYF
3H1E Chain:A ((6-125))-MKLLVVDDSSTMRRIIKNTLSRLG-YEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3H1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 545 -76522 -140.41 -665.41
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -140.41
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_3H1E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H1E-query.scw
PDB file : Tito_Scwrl_3H1E.pdb: