Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQLSKGQRIDLTKTNPGLTKAVIGLGWDTNKYSGGHDFDLDAS--AFLVDA-HDNCVNDLDFVFYNNLEHPSGGVIHTGDNRTGEGDGDDEQIIVDFSKIPAHIEKIGITVTIHDAEARSQNFGQVSNAFVRVVDEETQNELLRFDLGEDFSIETAVVVCELYRH-GGEWKFNAIGSGFSGGLAALCRNYGLQV
2QNG Chain:A ((28-197))-----------------KGIRKVELAVKWDPSPP-GDPATDLDIVAATFLAGDAYGKP---AYVVHFDS-RSPDGTIYLNRDSKDGKGFGWDEVMTLELNRLDSRYARVVVGVVIQQRD-AHRTFVGVLNPGLRMREG--YTVLAEDDFG-GVLGSTAATVGEFVRDDSGEWTFHPGIHGYDSDPATFARVMGGRQ


General information:
TITO was launched using:
RESULT:

Template: 2QNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 888 -88598 -99.77 -533.72
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -99.77
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_2QNG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QNG-query.scw
PDB file : Tito_Scwrl_2QNG.pdb: