Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKQGNQMSFLRTIILVSTFGG-LLFGYDTGVLNGALPYMGE------PDQLN--LNAFTEGL---VTSSLL-FGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTF---APNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALR-VLKKIRDEKRAAAELQEIEFAFKKEDQLEKAT--------FKDLSVPW-VRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGL-IGTTTALLLIGIFSLVLEGSPALPYVVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGLGMGVTVFCLWMVNFAVSFTFPILLAAIGLSTTFFIFVGLGICSVLFVKRFLPETKGLSLEQLEENFRAYDHSGAKKDSGAEVIG
4YB9 Chain:D ((19-462))------------LATLIAAFGSSFQYGYNVAAINSPSEFMKDFYAYTYYDRVGEYMNEFYLTLLWSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSELAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGL---RSLLANEEGWPILLGLTGIPAVLQLLFLPFFPESPRYLLIQKKDEAAAKSALRRL-------AEIEEI----LEEDRAEKAVGFISVLKLFKMRSLRWQVISIIVLMAG----QQLSGVNAIYYYADQIYLSAGVNEDDVQYVTAGTGAVNVLITVCAIFVVELMGRRFLLLLGFSVCFTACCVLTGALAL-QDVISWMPYVSIACVISYVIGHALGPSPIPALLVTEIFLQSSRPAAYMVAGTVHWLSNFTVGLVFPFIQVGLG-AYSFVIFAVICLLTTVYIFLIIPE-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2039 -301543 -147.89 -735.47
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.75

3D Compatibility (PKB) : -147.89
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.324

(partial model without unconserved sides chains):
PDB file : Tito_4YB9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YB9-query.scw
PDB file : Tito_Scwrl_4YB9.pdb: