Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFFKKLAASAGIGAAKVDTILEKD----AYFPGEEVQGTVHVKGGKIAQDIRYIDLQLSTRYVIVKDDEEH-----RKYATIHSFRVTG------------SFTIQPGEEHQFPFTFTLPLDTPITVG------------KVEVAVVTDLDIQGGIDK-SDHDRIFVEAHPWIENVLEAIENLGFRLNEADCEQAPYFQRRLPFVQEFEFVPTSGYYRQMLDELELIFLLDEDGLEIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELEDTEELEEVLEEILDQYAE
1SUJ Chain:A ((15-178))---------------AKLSIYLGKRDFVDHVEHVEPVDGVVLID-PE-YLKDRKVFVTLTCAFRYGRDDLDLIGMSFRKDLYSLATQVYPPETKEPLTPLQEKLMKKLGA-HAYPFCFKMGTNLPCSVTLQPGPDDTGKSCGVDFEVKAFCAENLEEKIHKRNSVQLVIRKVQFA---------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 508 -64775 -127.51 -526.62
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -127.51
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_1SUJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SUJ-query.scw
PDB file : Tito_Scwrl_1SUJ.pdb: