Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKETAWMKRKQLLYTEERKWEYGTILIEDGICLIENGEGDILLADSLQHSPIWIHHKGKWEQAGFQDKLVLACGAENISLSGGERIRYEKSVKRPLMAL------LDSLDDETFLAFLQHL-HSFGLSVFDCVFSYNKGVFSNTS--AGQGVSFYHFSNDTAQCAMQHHYNYSSEGTGDRFEWTASNGKRSIMYTAVQRGRK
1Y3T Chain:A ((245-334))-----------------------------------------------------------------CLEGQMTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVLVPGLFEPFFRTLGDPYEGHIFPC-KPQALRFDRILQNIEALDLKV------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 167 -18585 -111.28 -229.44
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -111.28
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.296

(partial model without unconserved sides chains):
PDB file : Tito_1Y3T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y3T-query.scw
PDB file : Tito_Scwrl_1Y3T.pdb: