Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNRDIVWHEASITKEEYQQKNKHKSSILWLTGLSGSGKSTIANAAARELF-EQGYQVIVLDGDNIRHGLNRDLGFSDEDRKENIRRIGEVAKLFVQQGTIVITAFISPFREDRQQVRELVEAG--------EFNEVYIKCDLDICEQRDPKGLYKKARNGEIPFFTGIDSPYEEPEAPELVLDSGQHDREACKNQLIEFVKQKLS
1D6J Chain:A ((8-203))--------HASALTRSERTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVE--------------------------APYEAPANPEVHVKNYELPVQDAVKQIIDYLDTK--


General information:
TITO was launched using:
RESULT:

Template: 1D6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 739 -66038 -89.36 -410.17
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -89.36
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_1D6J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D6J-query.scw
PDB file : Tito_Scwrl_1D6J.pdb: