Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSGKMKALMKKDGAFGAVLTEVPIPEIDKHEVLIKVKAASICGTDVHIYNWDQWARQRIKTPYVFGHEFSGIVEGVGENVSSVKVGEYVSAETHIVCGECVPCLTGKSHVCTNTAIIGV-DTAGCFAEYVKVPADNIWRNPADMDPSIASIQEPLGNAVHTVLESQPAGGTTA-VIGCGPIGLMAVAVAKAAGASQVIAIDKNEYRLRLAKQMGATCTVSIE--KEDPLKIVSALTS--GEGADLVCEMSGHPSAIAQGLAMAANGGRFHILSLPEHPVTIDLTNKVVFKGLTIQGITGRKMFSTWRQVSQLISSNMIDLAPVITHQFPLEEFEKGFELMRSGQCGKVILIP
1E3J Chain:A ((4-336))---DNLSAVLYKQNDLR--LEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACA-REIDIKSVF--RYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAAR-----------


General information:
TITO was launched using:
RESULT:

Template: 1E3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1924 -236280 -122.81 -722.57
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -122.81
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_1E3J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1E3J-query.scw
PDB file : Tito_Scwrl_1E3J.pdb: