Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSGKWFSLAAALSVTAIVGAGCSMSNGDAQKDTKTTAETKQTEQKTADSKKSNTQNSEFSLESQYFNDIKKVDGLETIQNPENILALVNKQYALPGNYEPSDLVIPDVEFSFEEKIQKRYIRKEAADALKTMFDAAKKEGYELA-AVSGYRSYDRQKVIFDNEVSLKGERKAKEAVAYPGESEHQTGLAMDISSRSNGFELNEAFGSTADGKWVQDNAYKYGFIIRYPKNKEDITKYEYEPWHLRYVGKKAAKVIQDNDLTLEEYFEKVKKI
4OX5 Chain:A ((14-178))------------------------------------------------------------------------------SIQGKYDEIIVANKHYPLSKDYNPGENPTAKAE-------------------LVKLIKAMQEAGFPISDHYSGFRSYETQTKLYQDYVN--GKEAADRYSARPGYSEHQTGLAFDVIGTDGDLVTEEKAA-----QWLLDHAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKE-AKEIAESGLSLEEYY------


General information:
TITO was launched using:
RESULT:

Template: 4OX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 749 11156 14.89 68.86
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 14.89
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_4OX5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OX5-query.scw
PDB file : Tito_Scwrl_4OX5.pdb: