Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKQQFIDMQEQGTSTIPNLLLTHYKQLGLNETELILLLKIKMHLEKGSYFPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIEECEDQNGIKFEKYSLQPLWGKLYE--YIQLAQNQTQERKAEGEQKSLYTIFEEEFARPLSPLECETLAIWQDQDQHDAQLIKHALKEAVLSGKLSFRYIDRILFEWKKNGLKTVEQAKIHSQKFRRVQAKQNEPQKEYKRQVPFYNWLEQ
2VN2 Chain:D ((2-120))-EKKKVAEWLAQGSIAVPKLLLGHYKQLGLGEGELVLLLHMQSFFEEGVLFPTPAELAERMTVSAAECMEMVRRLLQKGMIAIEE---------EKYTLEPLWEKLVHHLYTQAAQQGEL------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VN2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 320 -61386 -191.83 -568.38
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.72

3D Compatibility (PKB) : -191.83
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.673

(partial model without unconserved sides chains):
PDB file : Tito_2VN2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VN2-query.scw
PDB file : Tito_Scwrl_2VN2.pdb: